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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912255.1_cds_XP_016462298.1_55540
CDS Infomation

[gene=LOC107785489] [db_xref=GeneID:107785489] [protein=isovaleryl-CoA dehydrogenase, mitochondrial] [protein_id=XP_016462298.1] [location=join(10392..10508,12066..12149,12234..12291,14054..14178,14267..14311,15447..15495,15827..15936,17144..17220,17416..17466,17559..17623,19165..19319,19415..19455,19555..19609,19729..19785,20187..20333)] [gbkey=CDS]
Sequence

ATGCATAAATTGTTTGCAGCGAGGTCTTTGACATCTGCTTTGTGCAGAACCAAAAAGCAG
CAGCCACAGCTTGCTGCGTTTTCTACTTCCTTACTCTTCGATGATACTCAAAAACAGTTT
AAAGAAAGCGTGGCACAATTTGCTCAAGAGAATATTGCCCCTCATGCCGAAAAGATAGAT
AAAACAAATTATTTCCCGCAGGATGTTAATTTGTGGAAACTAATGGGGGATTTTAATCTC
CATGGTATTACAGTGCCAGAGGAATATGGAGGACTTGGCCTTGGTTATCTGTATCACTGC
ATAGCCATGGAAGAGATTAGTCGAGCATCAGGGTCAGTTGGCCTTTCTTATGGTGCCCAC
ACGAACCTATGCATTAATCAGTTGGTTAGAAATGGATCGCATGAGCAGAAGCAAAAGTAT
CTACCAAAGCTAATCAGTGGTGAACATGTGGGGGCTCTAGCTGTGAGTGAACCTAATGCC
GGGTCAGATGTTGTTAGCATGAAGTGCAAAGCTGATCGTGTTGAGGGTGGTTATGTTCTG
AATGGAAATAAAATGTGGTGCACAAATGGTCCAACTGCTCAGACGCTGGTTGTTTATGCA
AAAACGGATGTAGCAGCTGGTTCGAAAGGAATCACAGCATTCATTATCGAGAAAGGGATG
ACAGGATTCTCTACGGCCCAGAAATTAGACAAACTTGGGATGCGAGGGAGTGATACATGT
GAGCTTGTGTTTGAGAACTGTTTCGTCCCTGAAGAAAATGTTTTGGGGCAGGTAGGAAAA
GGTGTTTATGTCCTGATGTCGGGGCTCGATCTAGAGAGACTTGTTTTGTCATCTGGTCCT
GTTGGACTTATGCAAGCCTGTCTTGATGTCGTTCTCCCCTATGTTAAACAACGAGAACAA
TTTGGGCGACCGATTGGAGAATTTCAATTTATACAGGGAAAAGTTGCTGACATGTACACA
GCTTTGCAATCTTCAAGATCATATGTCTATTCTGTTGCAAGGGAATGTGACAGCGGGAAT
ATTAACACAAAGGATTGTGCTGGTGTTATACTCACTGCTGCTGAAAGAGCAACCCAAGTA
GCTCTTCAGGCGATTCAGTGCCTTGGAGGCAACGGCTATGTGAATGAGTACCCAACAGGA
CGTCTTCTCCGAGATGCCAAACTGTATGAGATTGGGGCAGGCACAAGTGAGATCAGAAGA
ATGATAATAGGTCGTGAACTCTTTAAAGAACAATAA

Peptide Sequence

PEP ID

XP_016462298.1
PEP Infomation

PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Nicotiana tabacum]
Sequence

MHKLFAARSLTSALCRTKKQQPQLAAFSTSLLFDDTQKQFKESVAQFAQENIAPHAEKID
KTNYFPQDVNLWKLMGDFNLHGITVPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAH
TNLCINQLVRNGSHEQKQKYLPKLISGEHVGALAVSEPNAGSDVVSMKCKADRVEGGYVL
NGNKMWCTNGPTAQTLVVYAKTDVAAGSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTC
ELVFENCFVPEENVLGQVGKGVYVLMSGLDLERLVLSSGPVGLMQACLDVVLPYVKQREQ
FGRPIGEFQFIQGKVADMYTALQSSRSYVYSVARECDSGNINTKDCAGVILTAAERATQV
ALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ

Transcript Sequence

Gene sequence data has not been registered.